Chapter 1 About

GseaVis is an advanced R package designed to enhance the visualization capabilities of Gene Set Enrichment Analysis (GSEA). It is compatible with enrichment objects generated by the GSEA/gseGO/gseKEGG functions in the clusterProfiler package. Additionally, it can parse and visualize outputs from the classic GSEA software. GseaVis also offers a range of useful tools to create diverse and insightful visualizations.

1.1 Citation

Jun Zhang (2022). GseaVis: An Implement R Package to Visualize GSEA Results. https://github.com/junjunlab/GseaVis

1.2 Installation

You can install the development version of GseaVis:

# install.packages("devtools")
devtools::install_github("junjunlab/GseaVis")

# or
remotes::install_github("junjunlab/GseaVis")

library(GseaVis)